K 10 svn:author V 3 jwb K 8 svn:date V 27 2020-06-05T01:55:49.186083Z K 7 svn:log V 592 biology/subread: Read alignment, quantification and mutation discovery The Subread package comprises a suite of software programs for processing next-gen sequencing read data including: Subread: a general-purpose read aligner Subjunc: a read aligner developed for aligning RNA-seq reads featureCounts: a software program developed for counting reads to genomic features such as genes, exons, promoters and genomic bins. Sublong: a long-read aligner that is designed based on seed-and-vote. exactSNP: discovers SNPs by testing signals against local background noise. END