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SVN  ƒsƒu€ƒsƒs# Created by: jrm@ftfl.ca
# $FreeBSD$

PORTNAME=		diamond
PORTVERSION=		0.7.12
DISTVERSIONPREFIX=	v
CATEGORIES=		biology

MAINTAINER=		jrm@ftfl.ca
COMMENT=		BLAST-compatible local sequence aligner

LICENSE=		BSD2CLAUSE

BUILD_DEPENDS=		${LOCALBASE}/include/boost:devel/boost-libs
RUN_DEPENDS=		${LOCALBASE}/include/boost:devel/boost-libs

ONLY_FOR_ARCHS=		amd64

USES=			cmake:outsource

CFLAGS+=		-DNDEBUG

USE_GITHUB=		yes
GH_ACCOUNT=		bbuchfink

PLIST_FILES=		bin/diamond

.include <bsd.port.mk>
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SVN  ‚r‚t€‚r‚rDIAMOND is a BLAST-compatible local aligner for mapping protein and translated
DNA query sequences against a protein reference database (BLASTP and BLASTX
alignment mode). The speedup over BLAST is up to 20,000 on short reads at a
typical sensitivity of 90-99% relative to BLAST depending on the data and
settings.

WWW: http://ab.inf.uni-tuebingen.de/software/diamond/
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3-9066.0.t414685-8vz2 modify-file true false /head/biology/Makefile

_4.0.t414685-8vz2 add-dir false false /head/biology/diamond

_5.0.t414685-8vz2 add-file true true /head/biology/diamond/Makefile

_8.0.t414685-8vz2 add-file true true /head/biology/diamond/distinfo

_a.0.t414685-8vz2 add-dir false false /head/biology/diamond/files

_b.0.t414685-8vz2 add-file true true /head/biology/diamond/files/patch-CMakeLists.txt

_e.0.t414685-8vz2 add-file true true /head/biology/diamond/pkg-descr


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