DELTA 451981 48 50 SVNm&%VCe{_]x^URˎ0]_+$Q:i2hCNSRdy8S@}{|ϵ/bEx~'h0h*yg;Q5f8"1dpX.MKJ09<XEaҔ6#]ɏ)xo =SHR]25'\g,ݵkq-IIo;𗮳~B6 ;5a,D-S[vћkA9-mIM[v(4yv-\W|gVʼG\Iczc &Wsw`U HLvF.?m]S&wd,zMuw%zM K6V!IOzF`̮u*u Jk+QGAI񩺚5,#5z1l`?bZZ.uD5 oZ'==)IÚ<:G1vA _..x?Gi?D(ENDREP DELTA 323349 476 129 SVNTIMESTAMP = 1510218548 SHA256 (hmmer-3.1b2.tar.gz) = dd16edf4385c1df072c9e2f58c16ee1872d855a018a2ee6894205277017b5536 SIZE (hmmer-3.1b2.tar.gz) = 5965253 ENDREP DELTA SVNHJHH--- configure.orig 2015-02-26 12:45:55 UTC +++ configure @@ -3912,6 +3912,7 @@ fi if test "$impl_choice" = "none"; then case $host in ia64-*-*) impl_choice=sse;; + amd64-*-*) impl_choice=sse;; i?86-*-*) impl_choice=sse;; x86*-*-*) impl_choice=sse;; powerpc*-*-*) impl_choice=vmx;; ENDREP DELTA 227349 92 31 SVN80+3ENDREP DELTA 371237 350 17 SVNx$p#Css2NvaWrZ=x^R]o }q[ܯMt]= "2ХٯhQ.)31s8{9dT1BJ#|ߡJ|Z;J8q;r9h;9#RVrXR55QCrx5Mq(HRp/ֲՙ!%y4θ,@O#c\D.4~DW ΋sk1jPdv qGcwe8?6˧X)\<m2x -0.ֻ s~^WYzL_Ot,mfXC:hOMg\0=;ϾDCM3k9LI6 }NǙ`pk (z?~0ENDREP id: 4-11871.0.r453972/1650 type: file pred: 4-11871.0.r451981/799 count: 28 text: 453972 0 578 1190 87c1b09da618cc8b3439d08446362df1 d19feaad14d7b6c52b0df3d0bea7adb8d74e4518 453971-9qac/_4 props: 300914 71 103 0 bb58aa814bbdf5f7c1ab04a05656f5a5 cpath: /head/biology/hmmer/Makefile copyroot: 0 / id: 7-11871.0.r453972/1946 type: file pred: 7-11871.0.r340717/807404 count: 10 text: 453972 604 171 154 8b7b61514bb72a7781cb4984878c671c e254ed4c715f074f9346b3055d54eb36037eb497 453971-9qac/_5 props: 300936 2259 98 0 8dda59e103a981389badbb35c2ee62ce cpath: /head/biology/hmmer/distinfo copyroot: 0 / id: 7-453972.0.r453972/2247 type: file count: 0 text: 453972 803 345 328 a907b1b982b363cc0417494d552b53ab d04999ad603c307192cefc389b06146a316e8ed7 453971-9qac/_9 props: 300936 2259 98 0 8dda59e103a981389badbb35c2ee62ce cpath: /head/biology/hmmer/files/patch-configure copyroot: 0 / PLAIN K 15 patch-configure V 28 file 7-453972.0.r453972/2247 END ENDREP id: 6-453972.0.r453972/2602 type: dir count: 0 text: 453972 2530 59 0 9cb2922b9f7b61a7c75588fce07ea5a7 cpath: /head/biology/hmmer/files copyroot: 0 / id: b-11871.0.r453972/2753 type: file pred: b-11871.0.r340718/851398 count: 6 text: 453972 1161 20 432 ee3a3ebb3db1e1d1ba956b246782fa60 9c22948cc9a2d15826e587fd5526f4795cf36b45 453971-9qac/_a props: 300936 2259 98 0 8dda59e103a981389badbb35c2ee62ce cpath: /head/biology/hmmer/pkg-descr copyroot: 0 / id: f-11871.0.r453972/3054 type: file pred: f-11871.0.r371237/6650 count: 14 text: 453972 1207 416 1793 4a924a900a347715a2807d4ea262972a 3573939c9cd0adac6c4b2af01f4f0b0e39e85c1e 453971-9qac/_b props: 300936 2259 98 0 8dda59e103a981389badbb35c2ee62ce cpath: /head/biology/hmmer/pkg-plist copyroot: 0 / PLAIN K 8 Makefile V 27 file 4-11871.0.r453972/1650 K 8 distinfo V 27 file 7-11871.0.r453972/1946 K 5 files V 27 dir 6-453972.0.r453972/2602 K 9 pkg-descr V 27 file b-11871.0.r453972/2753 K 11 pkg-message V 29 file d-11871.0.r340719/165427 K 9 pkg-plist V 27 file f-11871.0.r453972/3054 END ENDREP id: 2-11871.0.r453972/3654 type: dir pred: 2-11871.0.r451981/1354 count: 41 text: 453972 3356 285 0 e78225ec06bb6c4c85e02fc90ca0feaf cpath: /head/biology/hmmer copyroot: 0 / PLAIN K 8 Makefile V 26 file 3-9066.0.r452595/1242 K 7 ariadne V 26 dir 4-111985.0.r451982/897 K 7 artemis V 25 dir 4-51988.0.r451981/625 K 5 avida V 27 dir 4-57919.0.r440746/57011 K 5 babel V 25 dir 2-9147.0.r395828/1878 K 8 bcftools V 27 dir 4-388638.0.r452840/9348 K 8 bedtools V 28 dir 4-406676.0.r441847/48854 K 8 biococoa V 27 dir 4-181036.0.r451982/1590 K 4 blat V 27 dir 4-157190.0.r443073/1216 K 6 bowtie V 29 dir 4-410180.0.r449591/220125 K 7 bowtie2 V 28 dir 4-411698.0.r449986/14086 K 3 bwa V 28 dir 4-397851.0.r441814/73568 K 6 cd-hit V 29 dir 4-397318.0.r449591/220820 K 8 cdbfasta V 29 dir 4-397850.0.r431996/102787 K 6 chemeq V 26 dir 5-153895.0.r428829/956 K 8 clustalw V 27 dir 2-30406.0.r415839/59059 K 6 consed V 29 dir 4-213590.0.r421387/169413 K 4 crux V 27 dir 4-235460.0.r451982/2324 K 7 diamond V 27 dir 4-414686.0.r453752/1142 K 6 emboss V 27 dir 4-31178.0.r418829/61873 K 5 fasta V 28 dir 4-38205.0.r424411/182405 K 6 fasta3 V 27 dir 4-38207.0.r415503/88636 K 9 fastdnaml V 28 dir 4-33727.0.r405891/192753 K 7 fastool V 28 dir 4-397849.0.r430490/50562 K 8 fasttree V 29 dir 4-397848.0.r449591/222210 K 13 fastx-toolkit V 29 dir 4-397847.0.r412344/719421 K 9 fluctuate V 25 dir 4-45885.0.r401907/565 K 6 garlic V 26 dir 4-85720.0.r371237/6475 K 6 gff2ps V 28 dir 4-51813.0.r412344/720078 K 4 gmap V 28 dir 4-174086.0.r440746/58432 K 9 gperiodic V 28 dir 2-21330.0.r428152/154803 K 6 grappa V 28 dir 4-44738.0.r415498/235859 K 5 hmmer V 26 dir 2-11871.0.r453972/3654 K 6 htslib V 28 dir 4-374729.0.r452840/11648 K 5 iolib V 28 dir 4-240487.0.r440746/59163 K 6 iqtree V 27 dir 4-452595.0.r453620/1569 K 7 jalview V 29 dir 4-155905.0.r415498/236602 K 9 jellyfish V 29 dir 4-411785.0.r449591/222955 K 5 lagan V 28 dir 4-157464.0.r415503/89858 K 6 lamarc V 26 dir 4-45915.0.r428831/1297 K 13 libgtextutils V 29 dir 4-397846.0.r424427/101190 K 7 libsbml V 27 dir 4-234730.0.r441126/1709 K 19 linux-foldingathome V 29 dir 4-171590.0.r421387/170127 K 5 mafft V 29 dir 4-157209.0.r415498/237345 K 5 mapm3 V 29 dir 4-210625.0.r415498/238094 K 7 migrate V 26 dir 4-45878.0.r413499/2085 K 6 molden V 26 dir 2-18587.0.r453261/1019 K 5 mopac V 28 dir 2-18535.0.r449591/224334 K 7 mrbayes V 28 dir 4-203737.0.r444463/89156 K 6 mummer V 27 dir 4-203638.0.r453152/2788 K 6 muscle V 27 dir 4-213031.0.r425879/7950 K 11 ncbi-blast+ V 36 dir 4-370220.0-375848.r449591/225152 K 12 ncbi-toolkit V 27 dir 4-34402.0.r428135/12720 K 6 njplot V 33 dir 4-213034.0-426241.r427329/674 K 10 p5-AcePerl V 28 dir 4-31083.0.r449893/289326 K 22 p5-Bio-ASN1-EntrezGene V 29 dir 4-145476.0.r449893/290041 K 17 p5-Bio-Coordinate V 29 dir 4-428942.0.r449893/290761 K 10 p5-Bio-Das V 29 dir 4-141702.0.r449893/291475 K 15 p5-Bio-Das-Lite V 29 dir 4-250445.0.r449893/292189 K 16 p5-Bio-FeatureIO V 27 dir 4-449922.0.r449922/3059 K 11 p5-Bio-GFF3 V 29 dir 4-273031.0.r449893/292905 K 12 p5-Bio-Glite V 29 dir 4-231492.0.r412344/728199 K 15 p5-Bio-Graphics V 29 dir 4-229849.0.r449893/293616 K 14 p5-Bio-MAGETAB V 29 dir 4-236853.0.r412344/729641 K 12 p5-Bio-NEXUS V 29 dir 4-240135.0.r415498/240218 K 12 p5-Bio-Phylo V 29 dir 4-162248.0.r449893/294326 K 10 p5-Bio-SCF V 29 dir 4-240489.0.r412344/731789 K 10 p5-BioPerl V 35 dir 4-31084.0-428868.r449893/295144 K 14 p5-BioPerl-Run V 34 dir 4-161213.0-428872.r449927/2587 K 15 p5-transdecoder V 28 dir 4-411246.0.r430490/51263 K 4 paml V 27 dir 2-30407.0.r425174/64429 K 5 phrap V 27 dir 4-213596.0.r370983/3739 K 5 phred V 28 dir g-213596.0.r365765/23553 K 6 phylip V 28 dir 2-30408.0.r412344/734701 K 5 phyml V 27 dir 4-238140.0.r449234/1148 K 5 plink V 27 dir 4-304954.0.r451982/3006 K 8 plinkseq V 28 dir g-304954.0.r440746/59897 K 7 primer3 V 27 dir 4-66513.0.r354670/62518 K 8 protomol V 29 dir 4-161442.0.r441503/148085 K 5 psi88 V 28 dir 2-18534.0.r449591/226585 K 14 py-biom-format V 27 dir 4-414865.0.r439751/1067 K 12 py-biopython V 26 dir 4-31163.0.r448228/1002 K 12 py-bx-python V 27 dir 4-440232.0.r440232/2542 K 8 py-pysam V 27 dir 4-440231.0.r453556/1171 K 8 pycogent V 27 dir 4-236469.0.r419818/1200 K 7 pyfasta V 29 dir 4-244412.0.r415498/243704 K 12 python-nexus V 27 dir 4-246859.0.r446458/1012 K 9 recombine V 27 dir 4-45886.0.r418767/75989 K 8 ruby-bio V 26 dir 4-49156.0.r440343/1070 K 11 rubygem-bio V 34 dir 4-236468.0-433348.r433528/1273 K 8 samtools V 28 dir 4-374767.0.r452840/14024 K 7 seaview V 24 dir 2-9150.0.r446346/979 K 5 seqan V 27 dir 4-298619.0.r422156/2498 K 10 seqan-apps V 29 dir 4-414897.0.r450560/150761 K 6 seqan1 V 35 dir 4-298619.0-414898.r418767/76744 K 5 seqio V 25 dir 4-46640.0.r344538/970 K 8 seqtools V 28 dir 5-333374.0.r450351/82638 K 4 sim4 V 25 dir 4-31064.0.r344539/879 K 7 slclust V 29 dir 4-411697.0.r431996/103482 K 5 ssaha V 27 dir 4-215429.0.r451982/3694 K 11 tRNAscan-SE V 26 dir 4-56741.0.r451982/4380 K 8 t_coffee V 28 dir 4-53719.0.r449591/229413 K 6 tinker V 26 dir 2-14597.0.r453869/1918 K 10 treepuzzle V 28 dir 4-70552.0.r340722/506561 K 11 trimmomatic V 27 dir 4-411261.0.r411261/2756 K 5 ugene V 28 dir 4-312798.0.r450351/83378 K 8 vcftools V 28 dir 4-409624.0.r430483/48856 K 6 velvet V 26 dir 4-243919.0.r377443/787 K 4 wise V 28 dir 4-66053.0.r428152/155489 K 6 xmolwt V 28 dir 2-21329.0.r428152/156133 END ENDREP id: 1-9066.0.r453972/9051 type: dir pred: 1-9066.0.r453869/7318 count: 2181 text: 453972 3829 5209 0 08c9600c105037b7862bfc96ede748c3 cpath: /head/biology copyroot: 0 / PLAIN K 10 .arcconfig V 26 file 1-354154.0.r422906/41 K 14 .gitattributes V 27 file 1-411777.0.r411777/210 K 10 .gitignore V 26 file 1-348322.0.r376072/79 K 7 CHANGES V 26 file 1-99373.0.r452546/456 K 15 CONTRIBUTING.md V 27 file 1-348323.0.r348323/344 K 9 COPYRIGHT V 26 file 1-146787.0.r430107/51 K 4 GIDs V 28 file 1-168311.0.r453798/2347 K 8 Keywords V 27 dir 1-314142.0.r419368/1305 K 5 LEGAL V 24 file 1-748.0.r452080/197 K 5 MOVED V 26 file 1-69878.0.r453970/253 K 8 Makefile V 24 file 1-6.0.r424411/75633 K 2 Mk V 22 dir 1-5.0.r453873/2437 K 6 README V 25 file 1-2408.0.r340854/956 K 9 Templates V 25 dir 1-2932.0.r453460/4644 K 5 Tools V 26 dir 3-15302.0.r453896/2923 K 4 UIDs V 28 file 4-168311.0.r453798/2629 K 8 UPDATING V 27 file 1-102685.0.r453760/144 K 13 accessibility V 26 dir 1-42583.0.r453824/2602 K 6 arabic V 27 dir 1-38973.0.r453378/48682 K 9 archivers V 25 dir 1-242.0.r453790/28137 K 5 astro V 24 dir 1-301.0.r453547/8618 K 5 audio V 25 dir 1-148.0.r453966/47266 K 4 base V 28 dir 1-420954.0.r431796/79632 K 10 benchmarks V 23 dir 1-62.0.r453602/5259 K 7 biology V 25 dir 1-9066.0.r453972/9051 K 3 cad V 24 dir 1-276.0.r453891/6192 K 7 chinese V 26 dir 1-3770.0.r453378/55728 K 5 comms V 24 dir 1-76.0.r453885/12114 K 10 converters V 26 dir 1-1561.0.r453564/10653 K 9 databases V 25 dir 1-771.0.r453967/59876 K 9 deskutils V 26 dir 1-2098.0.r453898/15984 K 5 devel V 25 dir 1-73.0.r453969/332635 K 3 dns V 26 dir 1-6145.0.r453922/12938 K 7 editors V 23 dir 4-6.0.r453954/16111 K 9 emulators V 25 dir 1-181.0.r453946/10651 K 7 finance V 26 dir 1-4110.0.r453872/11938 K 6 french V 28 dir 1-25673.0.r453378/139777 K 3 ftp V 24 dir 1-199.0.r453586/6233 K 5 games V 26 dir 1-104.0.r453966/496114 K 6 german V 25 dir 1-7451.0.r453633/2684 K 8 graphics V 24 dir 1-94.0.r453928/58617 K 6 hebrew V 28 dir 3-31142.0.r453378/143444 K 9 hungarian V 29 dir 1p-38973.0.r453378/144909 K 3 irc V 25 dir 1-42.0.r453790/659602 K 8 japanese V 26 dir 1-410.0.r453865/412791 K 4 java V 26 dir 1-2798.0.r453869/15257 K 6 korean V 27 dir 1-5873.0.r453378/163693 K 4 lang V 24 dir 1-15.0.r453971/20934 K 4 mail V 24 dir 1-57.0.r453939/41387 K 4 math V 25 dir 1-162.0.r453970/40442 K 4 misc V 24 dir 7-35.0.r453955/28467 K 10 multimedia V 25 dir d-333.0.r453959/26415 K 3 net V 25 dir 1-22.0.r453966/591335 K 6 net-im V 28 dir 15-11144.0.r453713/11152 K 8 net-mgmt V 27 dir r-1011.0.r453953/100119 K 7 net-p2p V 26 dir g-29106.0.r453899/6944 K 4 news V 26 dir 1-145.0.r453790/913454 K 4 palm V 27 dir 1-6646.0.r451378/103414 K 6 polish V 27 dir tv-38973.0.r453632/2189 K 10 ports-mgmt V 25 dir 1-5132.0.r453949/5060 K 10 portuguese V 28 dir 1-17842.0.r453453/728167 K 5 print V 25 dir 1-79.0.r453790/930418 K 7 russian V 27 dir 1-1559.0.r453378/170926 K 7 science V 26 dir n-5356.0.r453933/12308 K 8 security V 26 dir 1-269.0.r453966/658656 K 6 shells V 22 dir w-6.0.r453353/3750 K 8 sysutils V 25 dir b-339.0.r453963/69535 K 8 textproc V 26 dir 1-322.0.r453966/756660 K 9 ukrainian V 28 dir g-39704.0.r453378/172381 K 10 vietnamese V 25 dir 1-4812.0.r453718/3041 K 3 www V 26 dir 1-114.0.r453941/145481 K 3 x11 V 24 dir 1-16.0.r453950/27745 K 10 x11-clocks V 25 dir 1-931.0.r452530/30861 K 11 x11-drivers V 27 dir 1-157567.0.r447735/4529 K 6 x11-fm V 27 dir 1-691.0.r453284/1228147 K 9 x11-fonts V 27 dir 1-543.0.r453381/1351857 K 11 x11-servers V 25 dir 1n-710.0.r452247/2645 K 10 x11-themes V 28 dir 1-14410.0.r453874/357665 K 12 x11-toolkits V 25 dir 1-120.0.r453968/17436 K 6 x11-wm V 23 dir 1-40.0.r453101/7436 END ENDREP id: 2-1.0.r453972/12748 type: dir pred: 2-1.0.r453971/24629 count: 448892 text: 453972 9221 3514 0 4d40be93fa7dc27d211ab8ef5a41d7bf props: 7322 2587 45 0 7a04b33bf8e35fd5c3d111baaf403dc5 cpath: /head copyroot: 0 / PLAIN K 8 branches V 23 dir 0-1.0.r453948/16949 K 4 head V 23 dir 2-1.0.r453972/12748 K 8 projects V 24 dir 0-377393.0.r441387/0 K 8 svnadmin V 22 dir 3-1.0.r453930/1247 K 4 tags V 22 dir 8-1.0.r449812/5278 END ENDREP id: 0.0.r453972/13181 type: dir pred: 0.0.r453971/25063 count: 453972 text: 453972 12963 205 0 81cc4765dadc85a621781f8d1d225fec props: 341041 7130 346 0 8b695b9f61597e4917effffba3bbfaa3 cpath: / copyroot: 0 / minfo-cnt: 36 4-11871.0.t453971-9qac modify-file true false /head/biology/hmmer/Makefile 7-11871.0.t453971-9qac modify-file true false /head/biology/hmmer/distinfo _6.0.t453971-9qac add-dir false false /head/biology/hmmer/files _7.0.t453971-9qac add-file true true /head/biology/hmmer/files/patch-configure b-11871.0.t453971-9qac modify-file true false /head/biology/hmmer/pkg-descr f-11871.0.t453971-9qac modify-file true false /head/biology/hmmer/pkg-plist 13181 13405