DELTA 397864 0 37 SVN„(… \ ‚'€[‚‚%[CFLAGS+= -fcommon EXPIRATION_DATE= 2020-09-30 DEPRECATED= Unmaintained and dead upstreamENDREP DELTA 405652 0 22 SVN‘\’9 \ ƒ7€[Ž'ƒ5[CFLAGS+= -fcommon EXPIRATION_DATE= 2020-09-30 DEPRECATED= Unmaintained and dead upstreamENDREP DELTA 516742 699 28 SVNŠ7‹ W … €V…0…VCFLAGS+= -fcommon EXPIRATION_DATE= 2020-09-30 DEPRECATED= Unmaintained and outdatedENDREP id: 5-44738.0.r546885/417 type: file pred: 5-44738.0.r397864/63 count: 14 text: 546885 0 115 645 bf77c0eeb089dc422f63606cc1bf1357 e60917bd2556629a3349e6eff9cd93c8ec32ac60 546884-bpz9/_4 props: 300914 71 103 0 bb58aa814bbdf5f7c1ab04a05656f5a5 cpath: /head/biology/grappa/Makefile copyroot: 0 / PLAIN K 8 Makefile V 26 file 5-44738.0.r546885/417 K 8 distinfo V 29 file 8-44738.0.r340717/806714 K 5 files V 27 dir 8-272537.0.r337010/1491 K 9 pkg-descr V 29 file g-44738.0.r415498/235353 END ENDREP id: 4-44738.0.r546885/913 type: dir pred: 4-44738.0.r415498/235859 count: 21 text: 546885 711 189 0 ff7955e9717ed1e04ef3cc6987e004f4 cpath: /head/biology/grappa copyroot: 0 / id: 5-157464.0.r546885/1089 type: file pred: 5-157464.0.r405652/47 count: 11 text: 546885 140 115 2361 a3d06f1a36b68a44de3c4fc4abce50ce ab1b45c751f8e1a33f353a369deefadee8c716b3 546884-bpz9/_6 props: 300914 71 103 0 bb58aa814bbdf5f7c1ab04a05656f5a5 cpath: /head/biology/lagan/Makefile copyroot: 0 / PLAIN K 8 Makefile V 28 file 5-157464.0.r546885/1089 K 8 distinfo V 30 file 8-157464.0.r340717/808901 K 5 files V 29 dir a-157464.0.r508834/169087 K 9 pkg-descr V 30 file e-157464.0.r340718/852895 END ENDREP id: 4-157464.0.r546885/1596 type: dir pred: 4-157464.0.r508834/169480 count: 18 text: 546885 1388 195 0 39ef8574e1114b40a6dcb7f9d2a264e0 cpath: /head/biology/lagan copyroot: 0 / id: 4-30408.0.r546885/1775 type: file pred: 4-30408.0.r516742/9590 count: 39 text: 546885 280 110 1423 9699c67c8adf8535d32e9723ba3328c9 ba1f31dd88cdde422eb9c9172a87686d6895fa95 546884-bpz9/_8 props: 300914 71 103 0 bb58aa814bbdf5f7c1ab04a05656f5a5 cpath: /head/biology/phylip/Makefile copyroot: 0 / PLAIN K 8 Makefile V 27 file 4-30408.0.r546885/1775 K 8 distinfo V 26 file 7-30408.0.r457755/552 K 9 pkg-descr V 27 file b-30408.0.r372070/1576 K 9 pkg-plist V 28 file d-30408.0.r371237/22396 END ENDREP id: 2-30408.0.r546885/2278 type: dir pred: 2-30408.0.r516742/10091 count: 47 text: 546885 2075 190 0 35b56cb268314700f3d33fd0fd2d056a cpath: /head/biology/phylip copyroot: 0 / PLAIN K 8 Makefile V 27 file 3-9066.0.r546333/47124 K 5 abyss V 28 dir 4-493842.0.r541232/18627 K 7 artemis V 28 dir 4-51988.0.r518482/119475 K 5 avida V 25 dir 4-57919.0.r515272/569 K 5 babel V 25 dir 2-9147.0.r395828/1878 K 8 bamtools V 27 dir 4-465808.0.r540909/3275 K 8 bcftools V 27 dir 4-388638.0.r544096/4151 K 8 bedtools V 27 dir 4-406676.0.r520414/1111 K 6 bioawk V 27 dir 4-537983.0.r537983/3532 K 8 biococoa V 28 dir 4-181036.0.r527847/46635 K 8 bolt-lmm V 27 dir 4-502673.0.r534185/3305 K 6 bowtie V 27 dir 4-410180.0.r541191/1445 K 7 bowtie2 V 29 dir 4-411698.0.r542423/116807 K 3 bwa V 27 dir 4-397851.0.r546721/1196 K 4 canu V 26 dir 4-456950.0.r535507/742 K 6 cd-hit V 29 dir 4-397318.0.r507372/543674 K 8 cdbfasta V 28 dir 4-397850.0.r460452/52177 K 6 checkm V 27 dir 4-486814.0.r509260/1020 K 13 clustal-omega V 27 dir 4-470582.0.r470582/3038 K 8 clustalw V 26 dir 2-30406.0.r470494/1388 K 9 cufflinks V 27 dir 4-502661.0.r546790/1171 K 9 cytoscape V 29 dir 4-473806.0.r518482/120121 K 7 ddocent V 29 dir 4-467808.0.r507372/545063 K 7 diamond V 27 dir 4-414686.0.r544321/2163 K 7 dsr-pdb V 29 dir 4-491546.0.r519824/213694 K 6 emboss V 27 dir 4-31178.0.r533989/61323 K 9 exonerate V 27 dir 4-474558.0.r474558/2994 K 5 fasta V 28 dir 4-38205.0.r508834/165512 K 6 fasta3 V 28 dir 4-38207.0.r508834/166760 K 9 fastahack V 27 dir 4-467485.0.r513910/1178 K 9 fastdnaml V 28 dir 4-33727.0.r405891/192753 K 7 fastool V 28 dir 4-397849.0.r460452/52822 K 5 fastp V 27 dir 4-500737.0.r531215/1968 K 6 fastqc V 27 dir 4-455236.0.r512461/1529 K 8 fasttree V 29 dir 4-397848.0.r507372/547187 K 13 fastx-toolkit V 27 dir 4-397847.0.r470124/1637 K 7 figtree V 27 dir 4-492079.0.r492079/2487 K 9 fluctuate V 25 dir 4-45885.0.r401907/565 K 9 freebayes V 29 dir 4-467806.0.r507372/547889 K 6 garlic V 26 dir 4-85720.0.r516742/8029 K 4 gatk V 27 dir 4-486502.0.r541723/1209 K 4 gcta V 27 dir 4-531770.0.r534185/3983 K 5 gemma V 27 dir 4-501873.0.r534190/2947 K 6 gff2ps V 26 dir 4-51813.0.r487807/1016 K 4 gmap V 29 dir 4-174086.0.r508834/167507 K 9 gperiodic V 25 dir 2-21330.0.r523524/954 K 8 graphlan V 26 dir 4-492071.0.r544867/587 K 6 grappa V 25 dir 4-44738.0.r546885/913 K 6 groopm V 26 dir 4-486812.0.r544832/512 K 9 haplohseq V 28 dir 4-512137.0.r528058/82849 K 7 hhsuite V 27 dir 4-502015.0.r546314/1452 K 6 hisat2 V 27 dir 4-489981.0.r489981/7797 K 5 hmmer V 26 dir 2-11871.0.r524533/2834 K 6 htslib V 27 dir 4-374729.0.r544090/6154 K 5 hyphy V 27 dir 4-469604.0.r545538/1143 K 3 igv V 27 dir 4-473356.0.r528706/2827 K 8 infernal V 27 dir 4-471850.0.r524268/3408 K 5 iolib V 26 dir 4-240487.0.r497508/606 K 6 iqtree V 27 dir 4-452595.0.r537101/1013 K 7 jalview V 29 dir 4-155905.0.r518482/121500 K 9 jellyfish V 27 dir 4-411785.0.r544090/6886 K 8 kallisto V 27 dir 4-455382.0.r544077/3359 K 5 lagan V 27 dir 4-157464.0.r546885/1596 K 6 lamarc V 25 dir 4-45915.0.r477992/560 K 9 libbigwig V 27 dir 4-506417.0.r506417/2991 K 13 libgtextutils V 27 dir 4-397846.0.r465904/1530 K 7 libsbml V 28 dir 4-234730.0.r539491/72445 K 19 linux-foldingathome V 34 dir 4-171590.0-528886.r534738/1260 K 5 mafft V 29 dir 4-157209.0.r415498/237345 K 5 mapm3 V 29 dir 4-210625.0.r415498/238094 K 7 migrate V 25 dir 4-45878.0.r464909/778 K 8 minimap2 V 27 dir 4-499895.0.r500860/1925 K 6 molden V 26 dir 2-18587.0.r516742/8708 K 5 mopac V 28 dir 2-18535.0.r507372/554944 K 6 mothur V 28 dir 4-502128.0.r534792/14811 K 7 mrbayes V 26 dir 4-203737.0.r532428/695 K 6 mummer V 29 dir 4-203638.0.r507372/556326 K 6 muscle V 26 dir 4-213031.0.r523339/631 K 11 ncbi-blast+ V 35 dir 4-370220.0-375848.r535391/19235 K 16 ncbi-cxx-toolkit V 27 dir 4-481520.0.r516742/9401 K 12 ncbi-toolkit V 27 dir 4-34402.0.r535391/20018 K 7 ngs-sdk V 27 dir 4-472158.0.r530713/2620 K 10 p5-AcePerl V 28 dir 4-31083.0.r481365/409824 K 22 p5-Bio-ASN1-EntrezGene V 26 dir 4-145476.0.r522439/608 K 14 p5-Bio-Cluster V 26 dir 4-493444.0.r519355/672 K 17 p5-Bio-Coordinate V 26 dir 4-428942.0.r530290/611 K 14 p5-Bio-DB-EMBL V 27 dir 4-519318.0.r519318/2891 K 20 p5-Bio-DB-NCBIHelper V 27 dir 4-519319.0.r519319/3064 K 10 p5-Bio-Das V 29 dir 4-141702.0.r481365/411991 K 15 p5-Bio-Das-Lite V 29 dir 4-250445.0.r481365/412708 K 16 p5-Bio-FeatureIO V 26 dir 4-449922.0.r530291/610 K 11 p5-Bio-GFF3 V 29 dir 4-273031.0.r481365/414141 K 12 p5-Bio-Glite V 29 dir 4-231492.0.r481365/414857 K 15 p5-Bio-Graphics V 29 dir 4-229849.0.r481365/415573 K 14 p5-Bio-MAGETAB V 26 dir 4-236853.0.r499759/561 K 12 p5-Bio-NEXUS V 29 dir 4-240135.0.r481365/417012 K 12 p5-Bio-Phylo V 29 dir 4-162248.0.r481365/417723 K 10 p5-Bio-SCF V 26 dir 4-240489.0.r497239/733 K 16 p5-Bio-Variation V 27 dir 4-519320.0.r522440/1435 K 10 p5-BioPerl V 33 dir 4-31084.0-428868.r540492/7574 K 14 p5-BioPerl-Run V 33 dir 4-161213.0-428872.r522441/675 K 13 p5-TrimGalore V 27 dir 4-455857.0.r518469/1133 K 15 p5-transdecoder V 29 dir 4-411246.0.r507372/558619 K 4 paml V 26 dir 2-30407.0.r545542/1065 K 5 pbbam V 27 dir 4-468100.0.r544090/7620 K 7 pbseqan V 27 dir 4-467901.0.r518334/2673 K 11 pear-merger V 28 dir 4-466449.0.r473009/64316 K 5 phrap V 28 dir 4-213596.0.r536688/73310 K 5 phred V 29 dir g-213596.0.r508834/171666 K 6 phylip V 26 dir 2-30408.0.r546885/2278 K 5 phyml V 27 dir 4-238140.0.r546884/3312 K 12 picard-tools V 27 dir 4-538672.0.r538672/5440 K 5 plink V 34 dir 4-304954.0-533993.r534190/3745 K 7 primer3 V 26 dir 4-66513.0.r477995/1037 K 8 prodigal V 26 dir 4-492058.0.r514336/587 K 11 prodigy-lig V 26 dir 4-492059.0.r538676/626 K 8 protomol V 28 dir 4-161442.0.r516742/10826 K 5 psi88 V 25 dir 2-18534.0.r541204/568 K 16 py-Genesis-PyAPI V 29 dir 4-472277.0.r472884/413833 K 12 py-biopython V 25 dir 4-31163.0.r538671/504 K 12 py-bx-python V 27 dir 4-440232.0.r540420/1056 K 11 py-cutadapt V 27 dir 4-455154.0.r518242/1118 K 8 py-dnaio V 26 dir 4-496770.0.r536409/988 K 7 py-ete3 V 27 dir 4-535339.0.r535339/2384 K 11 py-fastTSNE V 28 dir 4-487491.0.r528082/13494 K 11 py-gffutils V 28 dir 4-482400.0.r542200/52537 K 11 py-gtfparse V 27 dir 4-482398.0.r544312/1006 K 7 py-hits V 27 dir 4-535347.0.r535347/2072 K 9 py-loompy V 27 dir 4-480236.0.r539319/1000 K 8 py-macs2 V 27 dir 4-455383.0.r531674/2132 K 10 py-multiqc V 27 dir 4-512646.0.r518470/2047 K 25 py-orange3-bioinformatics V 29 dir 4-472358.0.r507372/566759 K 22 py-orange3-single-cell V 28 dir 4-476578.0.r534966/80095 K 15 py-pandas-charm V 28 dir 4-535340.0.r537026/46113 K 10 py-pyfaidx V 29 dir 4-482399.0.r498530/110058 K 8 py-pysam V 27 dir 4-440231.0.r538275/1035 K 13 py-scikit-bio V 27 dir 4-535344.0.r544938/2123 K 13 py-xenaPython V 27 dir 4-498729.0.r498729/2362 K 7 pyfasta V 29 dir 4-244412.0.r507372/568763 K 12 python-nexus V 27 dir 4-246859.0.r480370/1012 K 7 rainbow V 26 dir 4-466235.0.r530167/549 K 9 recombine V 25 dir 4-45886.0.r510754/883 K 8 ruby-bio V 25 dir 4-49156.0.r534089/569 K 11 rubygem-bio V 34 dir 4-236468.0-433348.r543176/1112 K 23 rubygem-bio-executables V 27 dir 4-543010.0.r543010/2516 K 33 rubygem-bio-old-biofetch-emulator V 27 dir 4-543011.0.r543011/2550 K 17 rubygem-bio-shell V 27 dir 4-543012.0.r543012/2480 K 8 samtools V 27 dir 4-374767.0.r544098/3482 K 4 scrm V 26 dir 4-535266.0.r535275/561 K 7 seaview V 25 dir 2-9150.0.r539893/1024 K 5 seqan V 27 dir 4-298619.0.r464043/3649 K 10 seqan-apps V 29 dir 4-414897.0.r519824/216618 K 6 seqan1 V 35 dir 4-298619.0-414898.r512232/50385 K 5 seqio V 25 dir 4-46640.0.r454906/710 K 5 seqtk V 27 dir 4-466379.0.r466379/3116 K 4 sim4 V 25 dir 4-31064.0.r344539/879 K 7 slclust V 28 dir 4-411697.0.r460452/59392 K 13 smithwaterman V 27 dir 4-467402.0.r467402/4868 K 6 stacks V 29 dir 4-466048.0.r507372/570902 K 4 star V 27 dir 4-499592.0.r531206/1051 K 9 stringtie V 26 dir 4-474480.0.r526916/566 K 7 subread V 28 dir 4-537982.0.r537982/13726 K 11 tRNAscan-SE V 26 dir 4-56741.0.r522898/1202 K 7 tabixpp V 27 dir 4-467343.0.r544090/9038 K 6 tophat V 28 dir 4-512997.0.r528058/83586 K 7 treekin V 28 dir 4-504268.0.r524642/11423 K 10 treepuzzle V 28 dir 4-70552.0.r340722/506561 K 8 trimadap V 26 dir 4-466367.0.r501207/632 K 11 trimmomatic V 29 dir 4-411261.0.r518482/122242 K 5 ugene V 34 dir 4-312798.0-534852.r535875/4269 K 6 vcflib V 27 dir 4-467553.0.r544090/9768 K 8 vcftools V 27 dir 4-409624.0.r476330/1075 K 6 velvet V 28 dir 4-243919.0.r458761/11452 K 9 viennarna V 28 dir 4-505017.0.r533989/62054 K 7 vsearch V 27 dir 4-501147.0.r539742/1063 K 2 vt V 27 dir 4-537926.0.r544091/4301 K 4 wise V 28 dir 4-66053.0.r517040/177781 END ENDREP id: 1-9066.0.r546885/10898 type: dir pred: 1-9066.0.r546884/11938 count: 2814 text: 546885 2455 8430 0 4aab27ab709d16c82efa4a9284b9f7f5 cpath: /head/biology copyroot: 0 / PLAIN K 10 .arcconfig V 26 file 1-354154.0.r422906/41 K 14 .gitattributes V 26 file 1-411777.0.r467740/54 K 11 .gitauthors V 26 file 1-467739.0.r543472/88 K 10 .gitignore V 26 file 1-348322.0.r458023/77 K 11 .gitmessage V 27 file 3-457790.0.r457790/987 K 7 CHANGES V 26 file 1-99373.0.r537134/686 K 15 CONTRIBUTING.md V 27 file 1-348323.0.r348323/344 K 9 COPYRIGHT V 26 file 1-146787.0.r521639/51 K 4 GIDs V 28 file 1-168311.0.r540988/2026 K 8 Keywords V 27 dir 1-314142.0.r535225/1330 K 5 LEGAL V 25 file 1-748.0.r546333/2239 K 5 MOVED V 27 file 1-69878.0.r546880/2699 K 8 Makefile V 23 file 1-6.0.r516635/2409 K 2 Mk V 22 dir 1-5.0.r545813/7522 K 6 README V 25 file 1-2408.0.r494236/641 K 9 Templates V 24 dir 1-2932.0.r544150/817 K 5 Tools V 26 dir 3-15302.0.r545812/3025 K 4 UIDs V 28 file 4-168311.0.r540988/2307 K 8 UPDATING V 29 file 1-102685.0.r544763/19290 K 13 accessibility V 27 dir 1-42583.0.r544824/80705 K 6 arabic V 27 dir 1-38973.0.r545101/55222 K 9 archivers V 25 dir 1-242.0.r546843/13852 K 5 astro V 24 dir 1-301.0.r546877/7758 K 5 audio V 25 dir 1-148.0.r546883/51385 K 4 base V 27 dir 1-420954.0.r542956/1557 K 10 benchmarks V 23 dir 1-62.0.r546128/6074 K 7 biology V 26 dir 1-9066.0.r546885/10898 K 3 cad V 24 dir 1-276.0.r546824/7368 K 7 chinese V 26 dir 1-3770.0.r545101/62121 K 5 comms V 24 dir 1-76.0.r546827/11236 K 10 converters V 26 dir 1-1561.0.r546844/11339 K 9 databases V 25 dir 1-771.0.r546879/57527 K 9 deskutils V 26 dir 1-2098.0.r546847/15166 K 5 devel V 25 dir 1-73.0.r546846/376936 K 3 dns V 26 dir 1-6145.0.r546822/13208 K 7 editors V 23 dir 4-6.0.r546765/16101 K 9 emulators V 25 dir 1-181.0.r546866/10788 K 7 finance V 25 dir 1-4110.0.r546194/8309 K 6 french V 28 dir 1-25673.0.r545101/149811 K 3 ftp V 24 dir 1-199.0.r546671/5355 K 5 games V 25 dir 1-104.0.r546876/56522 K 6 german V 25 dir 1-7451.0.r546219/2337 K 8 graphics V 24 dir 1-94.0.r546859/59402 K 6 hebrew V 28 dir 3-31142.0.r545101/152981 K 9 hungarian V 29 dir 1p-38973.0.r545101/154252 K 3 irc V 23 dir 1-42.0.r546364/6660 K 8 japanese V 26 dir 1-410.0.r546333/568454 K 4 java V 25 dir 1-2798.0.r546732/7599 K 6 korean V 25 dir 1-5873.0.r546704/6552 K 4 lang V 24 dir 1-15.0.r546851/19085 K 4 mail V 24 dir 1-57.0.r546829/39388 K 4 math V 25 dir 1-162.0.r546799/50240 K 4 misc V 24 dir 7-35.0.r546870/27358 K 10 multimedia V 25 dir d-333.0.r546860/24973 K 3 net V 24 dir 1-22.0.r546850/82239 K 6 net-im V 28 dir 15-11144.0.r546740/10127 K 8 net-mgmt V 26 dir r-1011.0.r546871/22244 K 7 net-p2p V 26 dir g-29106.0.r546672/5833 K 4 news V 24 dir 1-145.0.r546797/4272 K 6 polish V 27 dir tv-38973.0.r546220/1960 K 10 ports-mgmt V 25 dir 1-5132.0.r546730/5059 K 10 portuguese V 28 dir 1-17842.0.r545101/175875 K 5 print V 24 dir 1-79.0.r546861/16712 K 7 russian V 27 dir 1-1559.0.r545101/178434 K 7 science V 26 dir n-5356.0.r546838/17609 K 8 security V 25 dir 1-269.0.r546874/69515 K 6 shells V 22 dir w-6.0.r546831/3621 K 8 sysutils V 25 dir b-339.0.r546872/77386 K 8 textproc V 26 dir 1-322.0.r546839/104861 K 9 ukrainian V 28 dir g-39704.0.r545101/179789 K 10 vietnamese V 27 dir 1-4812.0.r545101/181488 K 3 www V 26 dir 1-114.0.r546875/134740 K 3 x11 V 24 dir 1-16.0.r546853/27491 K 10 x11-clocks V 24 dir 1-931.0.r546024/3679 K 11 x11-drivers V 27 dir 1-157567.0.r546109/7352 K 6 x11-fm V 24 dir 1-691.0.r546724/4498 K 9 x11-fonts V 25 dir 1-543.0.r546773/15132 K 11 x11-servers V 25 dir 1n-710.0.r546228/1930 K 10 x11-themes V 28 dir 1-14410.0.r546333/874194 K 12 x11-toolkits V 25 dir 1-120.0.r546852/92477 K 6 x11-wm V 23 dir 1-40.0.r546780/7121 END ENDREP id: 2-1.0.r546885/14639 type: dir pred: 2-1.0.r546884/15678 count: 537124 text: 546885 11070 3556 0 2c01c4334d5cce94c3a3b6d185c8307e props: 458023 3927 157 0 4d85142843815bcc29c89469bccb873c cpath: /head copyroot: 0 / PLAIN K 8 branches V 23 dir 0-1.0.r546868/19205 K 4 head V 23 dir 2-1.0.r546885/14639 K 8 projects V 24 dir 0-377393.0.r441387/0 K 8 svnadmin V 22 dir 3-1.0.r545764/1241 K 4 tags V 22 dir 8-1.0.r536699/5595 END ENDREP id: 0.0.r546885/15076 type: dir pred: 0.0.r546884/16115 count: 546885 text: 546885 14858 205 0 b0fd6e4e2673610300bf0131e3fdbc4c props: 341041 7130 346 0 8b695b9f61597e4917effffba3bbfaa3 cpath: / copyroot: 0 / minfo-cnt: 59 5-44738.0.t546884-bpz9 modify-file true false /head/biology/grappa/Makefile 5-157464.0.t546884-bpz9 modify-file true false /head/biology/lagan/Makefile 4-30408.0.t546884-bpz9 modify-file true false /head/biology/phylip/Makefile 15076 15300