DELTA 517828 0 405 SVN?B| >2 CATEGORIES= biology USE_GITHUB= yes GH_ACCOUNT= outpaddlingENDREP DELTA 517828 432 168 SVN"C75589733633 SHA256 (outpaddling-haplohseq-0.1.2_GH0.tar.gz) = 64f61023a6795decb680c23d142b1a349988d4c0e3bef8c7d52ca33bf42f29f0 SIZE (outpaddling-haplohseq-0.1.2_GH0.tar.gz) = 12084603 ENDREP id: 5-512137.0-561567.r561567/345 type: file pred: 5-512137.0.r517828/2576 count: 2 text: 561567 0 90 775 8114404f4be4e4f3b94d9cd2f8ee9f46 3231daff9ca0b1a829185eef32cf5aef21d79fee 561566-c1b3/_4 props: 300914 71 103 0 bb58aa814bbdf5f7c1ab04a05656f5a5 cpath: /head/biology/haplohseq/Makefile copyroot: 561567 /head/biology/haplohseq id: 8-512137.0-561567.r561567/678 type: file pred: 8-512137.0.r517828/2877 count: 2 text: 561567 116 201 195 e2559e7cc8b5b232204a8fcc4edd9aec 75b4634310ed7e771b9193a2ce8d117d48b5107a 561566-c1b3/_5 props: 300936 2259 98 0 8dda59e103a981389badbb35c2ee62ce cpath: /head/biology/haplohseq/distinfo copyroot: 561567 /head/biology/haplohseq PLAIN K 8 Makefile V 34 file 5-512137.0-561567.r561567/345 K 8 distinfo V 34 file 8-512137.0-561567.r561567/678 K 5 files V 27 dir a-512137.0.r517828/5254 K 9 pkg-descr V 28 file k-512137.0.r512137/6030 K 9 pkg-plist V 28 file h-517828.0.r517828/5440 END ENDREP id: 4-512137.0-561567.r561567/1277 type: dir pred: 4-512137.0.r517828/5966 count: 2 text: 561567 1015 249 0 968b6f51ef7e670900298d07dca712cf cpath: /head/biology/haplohseq copyfrom: 517828 /head/biology/haplohseq PLAIN K 8 Makefile V 26 file 3-9066.0.r555418/1195 K 5 abyss V 27 dir 4-493842.0.r550242/1474 K 7 artemis V 28 dir 4-51988.0.r518482/119475 K 5 avida V 26 dir 4-57919.0.r559904/7816 K 5 babel V 25 dir 2-9147.0.r395828/1878 K 8 bamtools V 27 dir 4-465808.0.r540909/3275 K 8 bcftools V 27 dir 4-388638.0.r554157/2920 K 8 bedtools V 27 dir 4-406676.0.r520414/1111 K 6 bioawk V 27 dir 4-537983.0.r537983/3532 K 8 biococoa V 28 dir 4-181036.0.r527847/46635 K 8 bolt-lmm V 26 dir 4-502673.0.r550247/614 K 6 bowtie V 27 dir 4-410180.0.r541191/1445 K 7 bowtie2 V 27 dir 4-411698.0.r554390/2116 K 3 bwa V 27 dir 4-397851.0.r559904/8488 K 4 canu V 26 dir 4-456950.0.r561227/645 K 6 cd-hit V 26 dir 4-397318.0.r561228/603 K 8 cdbfasta V 28 dir 4-397850.0.r460452/52177 K 6 checkm V 27 dir 4-486814.0.r559053/8591 K 13 clustal-omega V 27 dir 4-470582.0.r470582/3038 K 8 clustalw V 26 dir 2-30406.0.r470494/1388 K 9 cufflinks V 28 dir 4-502661.0.r557839/62336 K 9 cytoscape V 29 dir 4-473806.0.r518482/120121 K 7 ddocent V 29 dir 4-467808.0.r507372/545063 K 7 diamond V 27 dir 4-414686.0.r558772/1021 K 7 dsr-pdb V 29 dir 4-491546.0.r519824/213694 K 6 emboss V 27 dir 4-31178.0.r533989/61323 K 9 exonerate V 27 dir 4-474558.0.r474558/2994 K 5 fasta V 28 dir 4-38205.0.r508834/165512 K 6 fasta3 V 28 dir 4-38207.0.r508834/166760 K 9 fastahack V 27 dir 4-467485.0.r513910/1178 K 9 fastdnaml V 28 dir 4-33727.0.r405891/192753 K 7 fastool V 28 dir 4-397849.0.r460452/52822 K 5 fastp V 27 dir 4-500737.0.r531215/1968 K 6 fastqc V 27 dir 4-455236.0.r512461/1529 K 8 fasttree V 26 dir 4-397848.0.r561229/556 K 13 fastx-toolkit V 27 dir 4-397847.0.r470124/1637 K 7 figtree V 28 dir 4-492079.0.r555738/19570 K 9 fluctuate V 25 dir 4-45885.0.r401907/565 K 9 freebayes V 27 dir 4-467806.0.r559904/9168 K 6 garlic V 26 dir 4-85720.0.r516742/8029 K 4 gatk V 26 dir 4-486502.0.r548044/698 K 4 gcta V 26 dir 4-531770.0.r561231/660 K 5 gemma V 27 dir 4-501873.0.r559975/1494 K 6 gff2ps V 26 dir 4-51813.0.r487807/1016 K 4 gmap V 26 dir 4-174086.0.r551768/614 K 9 gperiodic V 25 dir 2-21330.0.r523524/954 K 8 graphlan V 26 dir 4-492071.0.r544867/587 K 6 grappa V 27 dir 4-44738.0.r547044/75010 K 6 groopm V 27 dir 4-486812.0.r559053/9224 K 9 haplohseq V 34 dir 4-512137.0-561567.r561567/1277 K 7 hhsuite V 27 dir 4-502015.0.r546314/1452 K 6 hisat2 V 27 dir 4-489981.0.r489981/7797 K 5 hmmer V 25 dir 2-11871.0.r549947/643 K 6 htslib V 27 dir 4-374729.0.r554155/4433 K 5 hyphy V 26 dir 4-469604.0.r561239/562 K 3 igv V 26 dir 4-473356.0.r556663/592 K 8 infernal V 26 dir 4-471850.0.r549951/599 K 5 iolib V 26 dir 4-240487.0.r497508/606 K 6 iqtree V 27 dir 4-452595.0.r561368/1594 K 7 jalview V 26 dir 4-155905.0.r559318/618 K 9 jellyfish V 27 dir 4-411785.0.r544090/6886 K 8 kallisto V 27 dir 4-455382.0.r544077/3359 K 5 lagan V 28 dir 4-157464.0.r547044/75699 K 6 lamarc V 25 dir 4-45915.0.r477992/560 K 9 libbigwig V 27 dir 4-506417.0.r506417/2991 K 13 libgtextutils V 27 dir 4-397846.0.r465904/1530 K 7 libsbml V 26 dir 4-234730.0.r558745/922 K 19 linux-foldingathome V 34 dir 4-171590.0-528886.r534738/1260 K 5 mafft V 29 dir 4-157209.0.r415498/237345 K 5 mapm3 V 28 dir 4-210625.0.r547537/13904 K 7 migrate V 25 dir 4-45878.0.r464909/778 K 8 minimap2 V 27 dir 4-499895.0.r500860/1925 K 6 molden V 26 dir 2-18587.0.r516742/8708 K 5 mopac V 28 dir 2-18535.0.r507372/554944 K 6 mothur V 27 dir 4-502128.0.r552729/1275 K 7 mrbayes V 26 dir 4-203737.0.r532428/695 K 6 mummer V 27 dir 4-203638.0.r553298/1690 K 6 muscle V 26 dir 4-213031.0.r523339/631 K 11 ncbi-blast+ V 34 dir 4-370220.0-375848.r561233/2415 K 16 ncbi-cxx-toolkit V 27 dir 4-481520.0.r550237/1130 K 12 ncbi-toolkit V 26 dir 4-34402.0.r546967/2276 K 7 ngs-sdk V 27 dir 4-472158.0.r559904/9897 K 10 p5-AcePerl V 28 dir 4-31083.0.r481365/409824 K 22 p5-Bio-ASN1-EntrezGene V 26 dir 4-145476.0.r522439/608 K 14 p5-Bio-Cluster V 26 dir 4-493444.0.r519355/672 K 17 p5-Bio-Coordinate V 26 dir 4-428942.0.r530290/611 K 14 p5-Bio-DB-EMBL V 27 dir 4-519318.0.r519318/2891 K 20 p5-Bio-DB-NCBIHelper V 27 dir 4-519319.0.r519319/3064 K 10 p5-Bio-Das V 29 dir 4-141702.0.r481365/411991 K 15 p5-Bio-Das-Lite V 29 dir 4-250445.0.r481365/412708 K 16 p5-Bio-FeatureIO V 26 dir 4-449922.0.r530291/610 K 11 p5-Bio-GFF3 V 29 dir 4-273031.0.r481365/414141 K 12 p5-Bio-Glite V 29 dir 4-231492.0.r481365/414857 K 15 p5-Bio-Graphics V 29 dir 4-229849.0.r481365/415573 K 14 p5-Bio-MAGETAB V 26 dir 4-236853.0.r499759/561 K 12 p5-Bio-NEXUS V 29 dir 4-240135.0.r481365/417012 K 12 p5-Bio-Phylo V 29 dir 4-162248.0.r481365/417723 K 10 p5-Bio-SCF V 26 dir 4-240489.0.r497239/733 K 16 p5-Bio-Variation V 27 dir 4-519320.0.r522440/1435 K 10 p5-BioPerl V 33 dir 4-31084.0-428868.r540492/7574 K 14 p5-BioPerl-Run V 33 dir 4-161213.0-428872.r522441/675 K 13 p5-TrimGalore V 27 dir 4-455857.0.r518469/1133 K 15 p5-transdecoder V 29 dir 4-411246.0.r507372/558619 K 4 paml V 26 dir 2-30407.0.r545542/1065 K 5 pbbam V 27 dir 4-468100.0.r544090/7620 K 7 pbseqan V 27 dir 4-467901.0.r518334/2673 K 11 pear-merger V 28 dir 4-466449.0.r559904/10542 K 5 phrap V 28 dir 4-213596.0.r536688/73310 K 5 phred V 29 dir g-213596.0.r508834/171666 K 6 phylip V 27 dir 2-30408.0.r547044/76384 K 5 phyml V 27 dir 4-238140.0.r546884/3312 K 12 picard-tools V 26 dir 4-538672.0.r547056/202 K 5 plink V 33 dir 4-304954.0-533993.r550249/676 K 6 pooler V 27 dir 4-555418.0.r560817/1022 K 7 primer3 V 26 dir 4-66513.0.r477995/1037 K 8 prodigal V 26 dir 4-492058.0.r514336/587 K 11 prodigy-lig V 26 dir 4-492059.0.r538676/626 K 8 protomol V 28 dir 4-161442.0.r516742/10826 K 5 psi88 V 25 dir 2-18534.0.r541204/568 K 16 py-Genesis-PyAPI V 29 dir 4-472277.0.r559531/232241 K 14 py-biom-format V 34 dir 4-414865.0-549943.r561187/1560 K 12 py-biopython V 25 dir 4-31163.0.r552519/997 K 12 py-bx-python V 29 dir 4-440232.0.r559531/232903 K 11 py-cutadapt V 27 dir 4-455154.0.r518242/1118 K 8 py-dnaio V 26 dir 4-496770.0.r536409/988 K 7 py-ete3 V 28 dir 4-535339.0.r558168/59173 K 11 py-fastTSNE V 28 dir 4-487491.0.r528082/13494 K 11 py-gffutils V 28 dir 4-482400.0.r542200/52537 K 11 py-gtfparse V 29 dir 4-482398.0.r559531/233558 K 7 py-hits V 27 dir 4-535347.0.r535347/2072 K 9 py-loompy V 27 dir 4-480236.0.r539319/1000 K 8 py-macs2 V 27 dir 4-455383.0.r531674/2132 K 10 py-multiqc V 27 dir 4-512646.0.r548989/2856 K 25 py-orange3-bioinformatics V 29 dir 4-472358.0.r507372/566759 K 22 py-orange3-single-cell V 28 dir 4-476578.0.r561562/60950 K 15 py-pandas-charm V 29 dir 4-535340.0.r559531/234218 K 10 py-pyfaidx V 29 dir 4-482399.0.r559531/234875 K 8 py-pysam V 29 dir 4-440231.0.r559531/235567 K 13 py-scikit-bio V 28 dir 4-535344.0.r555738/20218 K 13 py-xenaPython V 29 dir 4-498729.0.r559531/236220 K 7 pyfasta V 29 dir 4-244412.0.r559531/236873 K 12 python-nexus V 29 dir 4-246859.0.r559531/237529 K 7 rainbow V 26 dir 4-466235.0.r530167/549 K 9 recombine V 25 dir 4-45886.0.r510754/883 K 8 ruby-bio V 25 dir 4-49156.0.r534089/569 K 11 rubygem-bio V 34 dir 4-236468.0-433348.r543176/1112 K 23 rubygem-bio-executables V 27 dir 4-543010.0.r543010/2516 K 33 rubygem-bio-old-biofetch-emulator V 27 dir 4-543011.0.r543011/2550 K 17 rubygem-bio-shell V 27 dir 4-543012.0.r543012/2480 K 8 samtools V 27 dir 4-374767.0.r554156/3064 K 4 scrm V 26 dir 4-535266.0.r535275/561 K 7 seaview V 25 dir 2-9150.0.r539893/1024 K 5 seqan V 27 dir 4-298619.0.r464043/3649 K 10 seqan-apps V 29 dir 4-414897.0.r519824/216618 K 6 seqan1 V 35 dir 4-298619.0-414898.r512232/50385 K 5 seqio V 25 dir 4-46640.0.r454906/710 K 5 seqtk V 27 dir 4-466379.0.r466379/3116 K 4 sim4 V 25 dir 4-31064.0.r344539/879 K 7 slclust V 28 dir 4-411697.0.r460452/59392 K 13 smithwaterman V 27 dir 4-467402.0.r467402/4868 K 6 stacks V 26 dir 4-466048.0.r561234/622 K 4 star V 27 dir 4-499592.0.r561235/1849 K 9 stringtie V 26 dir 4-474480.0.r526916/566 K 7 subread V 26 dir 4-537982.0.r548871/614 K 11 tRNAscan-SE V 26 dir 4-56741.0.r522898/1202 K 7 tabixpp V 26 dir 4-467343.0.r556113/560 K 7 treekin V 28 dir 4-504268.0.r524642/11423 K 10 treepuzzle V 28 dir 4-70552.0.r340722/506561 K 8 trimadap V 26 dir 4-466367.0.r501207/632 K 11 trimmomatic V 29 dir 4-411261.0.r518482/122242 K 5 ugene V 34 dir 4-312798.0-534852.r559737/7928 K 6 vcflib V 28 dir 4-467553.0.r559904/11279 K 8 vcftools V 27 dir 4-409624.0.r476330/1075 K 6 velvet V 28 dir 4-243919.0.r458761/11452 K 9 viennarna V 27 dir 4-505017.0.r557171/1818 K 7 vsearch V 27 dir 4-501147.0.r539742/1063 K 2 vt V 27 dir 4-537926.0.r554660/1876 K 4 wise V 28 dir 4-66053.0.r517040/177781 END ENDREP id: 1-9066.0.r561567/9979 type: dir pred: 1-9066.0.r561562/69580 count: 2902 text: 561567 1491 8475 0 d00331f57f795fb9e9dc0ed4591dd9d2 cpath: /head/biology copyroot: 0 / PLAIN K 10 .arcconfig V 25 file 1-354154.0.r556086/0 K 14 .gitattributes V 26 file 1-411777.0.r467740/54 K 11 .gitauthors V 26 file 1-467739.0.r560355/72 K 10 .gitignore V 26 file 1-348322.0.r458023/77 K 11 .gitmessage V 27 file 3-457790.0.r457790/987 K 7 CHANGES V 26 file 1-99373.0.r556820/186 K 15 CONTRIBUTING.md V 27 file 1-348323.0.r348323/344 K 9 COPYRIGHT V 26 file 1-146787.0.r559746/49 K 4 GIDs V 29 file 1-168311.0.r560497/15055 K 8 Keywords V 27 dir 1-314142.0.r552967/1308 K 5 LEGAL V 25 file 1-748.0.r556791/2569 K 5 MOVED V 26 file 1-69878.0.r561444/378 K 8 Makefile V 23 file 1-6.0.r516635/2409 K 2 Mk V 22 dir 1-5.0.r561520/4964 K 6 README V 25 file 1-2408.0.r494236/641 K 9 Templates V 24 dir 1-2932.0.r544150/817 K 5 Tools V 26 dir 3-15302.0.r545812/3025 K 4 UIDs V 29 file 4-168311.0.r560497/15337 K 8 UPDATING V 28 file 1-102685.0.r561486/8077 K 13 accessibility V 27 dir 1-42583.0.r560805/72867 K 6 arabic V 27 dir 1-38973.0.r558365/51295 K 9 archivers V 25 dir 1-242.0.r561428/13161 K 5 astro V 24 dir 1-301.0.r561066/7350 K 5 audio V 25 dir 1-148.0.r561564/47361 K 4 base V 27 dir 1-420954.0.r542956/1557 K 10 benchmarks V 23 dir 1-62.0.r561104/7941 K 7 biology V 25 dir 1-9066.0.r561567/9979 K 3 cad V 25 dir 1-276.0.r561520/12333 K 7 chinese V 26 dir 1-3770.0.r559827/10016 K 5 comms V 24 dir 1-76.0.r561562/80747 K 10 converters V 26 dir 1-1561.0.r560727/15156 K 9 databases V 26 dir 1-771.0.r561562/140963 K 9 deskutils V 27 dir 1-2098.0.r561562/156152 K 5 devel V 25 dir 1-73.0.r561562/555401 K 3 dns V 26 dir 1-6145.0.r561363/13001 K 7 editors V 23 dir 4-6.0.r561327/14026 K 9 emulators V 25 dir 1-181.0.r561527/10153 K 7 finance V 26 dir 1-4110.0.r561510/10987 K 6 french V 28 dir 1-25673.0.r558365/142781 K 3 ftp V 24 dir 1-199.0.r561547/5379 K 5 games V 25 dir 1-104.0.r561546/57078 K 6 german V 25 dir 1-7451.0.r560638/2282 K 8 graphics V 25 dir 1-94.0.r561562/614620 K 6 hebrew V 28 dir 3-31142.0.r558365/145889 K 9 hungarian V 29 dir 1p-38973.0.r558365/147160 K 3 irc V 25 dir 1-42.0.r561486/471296 K 8 japanese V 25 dir 1-410.0.r561053/16021 K 4 java V 27 dir 1-2798.0.r560492/708763 K 6 korean V 26 dir 1-5873.0.r559598/30497 K 4 lang V 24 dir 1-15.0.r561474/19157 K 4 mail V 24 dir 1-57.0.r561566/39632 K 4 math V 26 dir 1-162.0.r561562/707472 K 4 misc V 24 dir 7-35.0.r561413/27841 K 10 multimedia V 25 dir d-333.0.r561544/25657 K 3 net V 25 dir 1-22.0.r561562/791653 K 6 net-im V 29 dir 15-11144.0.r561486/481503 K 8 net-mgmt V 27 dir r-1011.0.r561486/503463 K 7 net-p2p V 26 dir g-29106.0.r561334/6199 K 4 news V 24 dir 1-145.0.r560695/5126 K 6 polish V 27 dir tv-38973.0.r560639/1963 K 10 ports-mgmt V 28 dir 1-5132.0.r559531/2070829 K 10 portuguese V 26 dir 1-17842.0.r558593/1801 K 5 print V 25 dir 1-79.0.r561385/492753 K 7 russian V 27 dir 1-1559.0.r560366/390427 K 7 science V 27 dir n-5356.0.r561562/810079 K 8 security V 26 dir 1-269.0.r561562/880631 K 6 shells V 22 dir w-6.0.r560707/3613 K 8 sysutils V 25 dir b-339.0.r561563/81544 K 8 textproc V 27 dir 1-322.0.r561562/1081438 K 9 ukrainian V 28 dir g-39704.0.r558365/172502 K 10 vietnamese V 27 dir 1-4812.0.r558365/174201 K 3 www V 27 dir 1-114.0.r561562/1227988 K 3 x11 V 26 dir 1-16.0.r561562/1255785 K 10 x11-clocks V 27 dir 1-931.0.r560805/1439164 K 11 x11-drivers V 27 dir 1-157567.0.r560264/4147 K 6 x11-fm V 24 dir 1-691.0.r561471/2737 K 9 x11-fonts V 25 dir 1-543.0.r561489/17411 K 11 x11-servers V 25 dir 1n-710.0.r560826/1925 K 10 x11-themes V 27 dir 1-14410.0.r561223/24959 K 12 x11-toolkits V 25 dir 1-120.0.r561341/16777 K 6 x11-wm V 23 dir 1-40.0.r561316/6589 END ENDREP id: 2-1.0.r561567/13740 type: dir pred: 2-1.0.r561566/43390 count: 551114 text: 561567 10150 3577 0 10f35cb9dd8807540cd6394087fc26d2 props: 458023 3927 157 0 4d85142843815bcc29c89469bccb873c cpath: /head copyroot: 0 / PLAIN K 8 branches V 23 dir 0-1.0.r561556/18252 K 4 head V 23 dir 2-1.0.r561567/13740 K 8 projects V 24 dir 0-377393.0.r441387/0 K 8 svnadmin V 22 dir 3-1.0.r560353/1633 K 4 tags V 22 dir 8-1.0.r551657/5646 END ENDREP id: 0.0.r561567/14177 type: dir pred: 0.0.r561566/43827 count: 561567 text: 561567 13959 205 0 3eeb986bc544cec389a4ac1d410427de props: 341041 7130 346 0 8b695b9f61597e4917effffba3bbfaa3 cpath: / copyroot: 0 / minfo-cnt: 62 4-512137._0.t561566-c1b3 add-dir false false /head/biology/haplohseq 517828 /head/biology/haplohseq 5-512137._0.t561566-c1b3 modify-file true false /head/biology/haplohseq/Makefile 8-512137._0.t561566-c1b3 modify-file true false /head/biology/haplohseq/distinfo 14177 14401